NetBalancer 歷史舊版本 Page13

更新時間：2020-06-18
更新細節：

What's new in this version:

New Functionality:
- Added support for importing protein features from the GFF3 format
- Enabled features to be preserved when a replacement leaves the sequence length unchanged

Enhancements:
- Enabled the import of custom user fields from Vector NTI databases
- Increased the 3' match length limit to 25 bases when importing primers from a list
- Enabled capture of the history of a protein translated from DNA when importing from Vector NTI Advance
- Enhanced primer tooltips to include % GC for the annealed region
- Improved copy and paste of sequence alignments into text editors and other programs
- Increased the size of the DOI field when editing references
- Made various color, layout, and textual enhancements

Fixes:
- Mandated use of the proper default font size when creating new files, importing from online, and opening non-native files
- Corrected an issue that prevented importing primers into multiple files in a collection
- Corrected a regression with displaying translations and the "Original Sequence" when no sequences are aligned to the reference DNA sequence
- Enabled changing methylation for placeholder files
- Fixed various issues when working with placeholder files
- Implemented automatic correction of invalid alignments to a reference sequence computed with prior versions
- Fixed an issue that prevented manually specifying the zoomed range
- Corrected the "+" symbol in plasmid names when importing from "SnapGene Online Sequences"
- Ensured correct updating of the zoomed range when navigating to matches with the Find tool
- Addressed an issue with specifying the position of protein interchain bond locations
- Removed the "Codons" cascading menu when interacting with protein sequences
- Corrected an issue that prevented importing multi-sequence GenBank and GenPept files into a collection
- Ensured that translation numbering is maintained when using Make Protein from multiple selected translated features
- Ensured that the match threshold controls are listed only once when importing features from a SnapGene file
- Corrected an issue that could cause file names to be clipped in source menus
- Fixed an issue that caused files to be marked as modified after hovering over hyperlinks in the Description Panel
- Ensured that stop codons present in protein query strings are included in the search results
- Improved the import of multi-part qualifiers from Geneious
- Fixed an issue with undo of sequence color changes that are limited to a single strand
- Corrected the "Copy" shortcut when viewing a protein sequence or multi-protein alignment
- Ensured more robust behavior when adding primers to DNA sequences
- Turned on the display of truncated primer description data when full descriptions are toggled off in Primers view
- Corrected an issue in which simplified primer binding sites were not shown after modifying hybridization parameters
- Ensured that sufficient space is always allocated above displays of complex primer binding sites in Sequence view
- Turned on display of the parental enzyme set when viewing Nicking Endonucleases in Sequence and Map views
- Improved reliability when importing from Addgene
- Improved the import of Addgene sequences that contain slashes in their names
- Ensured that side toolbar buttons in dialogs are not hidden
- Corrected a regression in which two copies of common features such as EGFP were sometimes annotated when detecting common features
- Removed "Match Threshold" controls from the "Add to Common Features" dialog

更新時間：2020-06-16
更新細節：

更新時間：2020-06-12
更新細節：

What's new in this version:

Fixed:
- Error on checking for update with Chinese and Polish localizations
- Mistakes in localization can cause errors at runtime
- Updated Polish and Russian localizations

更新時間：2020-06-09
更新細節：

What's new in this version:

Fixes:
- Crashing on clicking links to other brains pasted as attachments
- Error on changing theme/wallpaper
- Find and/or replace causes hang if there is only one result and it is at the start of the first line
- Exporting to folders gives error if any thoughts have notes that are read-only
- Files added/created are being set as read-only
- Copied in file attachments are being created as read-only
- Error on moving a file into TheBrain
- Error on "Paste Image" when adding attachment to thought
- Error when adding a file from the templates list
- Deletion fails if there are read-only internal attachments on a thought
- Hardware-based customization icon
- Installer should not cause/recommend a reboot/restart

更新時間：2020-06-03
更新細節：

更新時間：2020-06-02
更新細節：

更新時間：2020-05-28
更新細節：

What's new in this version:

New Features:
- Notes: Make paste of color information from HTML an optional preference (results in cleaner text)
- Statistics dialog shows `Local Id` of brain e.g. U01/B01

Fixes:
- Windows: Thought links in notes are not working
- Notes: Subscript and Superscript tags cannot be escaped
- Windows: brain:// protocol does not work from external applications if TheBrain is already open
- Notes: Exception during paste of image leads to unrecoverable error

更新時間：2020-05-25
更新細節：

更新時間：2020-05-23
更新細節：

更新時間：2020-05-22
更新細節：

What's new in this version:

Enhancements:
- Enhanced Sequence view so that when two panels of sequence are visible in a split window, the minimap at the top shows the visible regions from both panels
- Enhanced cloning dialogs to fit on smaller displays
- Support polyA_site point features
- Made various textual enhancements

Fixes:
- Enhanced the GFF3 importer to handle files that mark a single sequence with multiple references
- Fixed an issue that prevented opening of some Vector NTI® .apr alignment files
- Corrected a regression that prevented files in a collection's "Working Set" from being listed in source menus in action dialogs
- Improved stability when importing protein features from another SnapGene file
- Corrected an issue that could result in poor alignments
- Corrected a regression that prevented restriction sites blocked by methylation from being shown in gray in Enzymes View using Numbers mode
- Corrected a regression that prevented sorting of restriction sites in Enzymes view by location of the first site or by distance from the selection
- Ensured proper import of SnapGene online sequence files that contain "&" in their names, such as the COVID-19 genome file
- Corrected a regression that could prevent enzymes in aligned sequences from reflecting the chosen option for displaying enzymes
- Ensured that Enzymes view does not scroll when toggling enzyme visibility
- Corrected an issue that made it difficult to trim aligned sequences by dragging a trimming handle when using double-stranded DNA format
- Improved the export to GenBank and other text formats of features that contain "&" and other symbols in qualifiers
- Improved the appearance of a selection in an aligned sequence when manual trimming partially occludes the selection
- Corrected a regression that prevented invoking the Destroy Restriction Site or Remove Restriction Fragment dialogs by pressing Delete or Backspace in Enzymes view
- Ensured that toggling enzyme visibility no longer marks a file as unsaved
- Fixed an issue that could prevent dashes within gaps from being shown when viewing an alignment to a reference DNA sequence
- Prevented aligned bases from being shown in red at the endpoints of an alignment
- Fixed an issue that could cause "Redo Alignment" to fail for some files
- Ensured that the Edit Feature dialog correctly indicates that segment ranges can overlap if features with overlapping segments were imported from GenBank or other file formats
- Improved the default ratio between the two panel heights when generating a split window
- Prevented unnecessary vertical space from being allocated when laying out aligned sequences in double-stranded DNA format when enzymes are visible
- Improved the file information shown for registered file types in the Windows Explorer and the macOS Finder
- Improved the display of aligned regions in Map view